R#
Programming Language
Welcome,
R#
(/ˌɑːr ˈʃɑːrp/ ar SHARP) programming language is a kind of R liked vectorized language
implements on .NET clr environment for the bioinformatics data analysis.
#' print hello world
const hello = function(word) {
print(`hello ${word}!`);
}
hello(["world", "R# language"]);
# [1] "hello world!" "hello R# language!"
Installation
Docker Image
Install a R# Package
DEMO
require(MSImaging);
require(mzkit);
require(ggplot);
options(memory.load = "max");
bitmap(file = "./HR2MSI_mouse_urinary_bladder_S096_RGB.png", size = [3300, 2000]) {
# load mzpack/imzML raw data file
# and config ggplot data source driver
# as MSImaging data reader
ggplot(open.mzpack(system.file("data/HR2MSI mouse urinary bladder S096 - Figure1.cdf", package = "MSImaging")),
padding = "padding: 200px 600px 200px 250px;"
)
# rendering of rgb channels ion m/z
+ geom_red(mz = 743.5468, tolerance = "da:0.3")
+ geom_green(mz = 798.5414, tolerance = "da:0.3")
+ geom_blue(mz = 741.5303, tolerance = "da:0.3")
+ theme(panel.background = "black", panel.grid = element_blank())
+ geom_MSIfilters(TrIQ_scale(0.999))
# add ggplot charting elements
+ ggtitle("HR2MSI mouse urinary bladder S096 - Figure1")
+ labs(x = "Dimension(X)", y = "Dimension(Y)")
+ scale_x_continuous(labels = "F0")
+ scale_y_continuous(labels = "F0")
;
}